Teaching Roles

Imperial College London



For postgraduate students

• Providing input to Computer Science Masters and Ph.D. students for their projects.

• Nextflow Workflow Programming - I organised and coordinated the course. This 3-day workshop equips participants with a grounding in developing standardised, reproducible, easy to maintain and deploy computational pipelines.
• Python Programming - I delivered the Python programming courses at both the Chelsea and Sutton sites. The course was designed specifically for researchers at the ICR (Institute of Cancer Research) and Royal Marsden hospital.

• CS5234 Large-scale data storage and analysis (with Dr. Gregory Chockler)
• CS5234 I co-supervised MSc Projects (with Prof. Hugh Shanahan)

• CS1801 Introduction to Java programming (with Dr. Pierre-Malo Deniélou, Nuno Barreiro)
• CS1820/CS2830 Java Robotics (with Prof. Dave Cohen)
• CS2844 Computer Graphics [assignment marking] (with Dr. Jackie Daykin)
• CS2855 Databases (with Prof. Iddo Tzameret)
• CS3110/CS5110 Bioinformatics - I delivered the guest lecture to Computer Science students. The talk focussed on Next-generation Sequencing (NGS) and Transcriptomics and briefly discussed cluster computing and the cloud for analysis of RNA-seq data.

• CloudTech'16 in Marrakech, Morocco - I ran a 2.5 hour workshop, including a talk. This focused on utilising distributed computing (Apache Spark) for Transcriptomics. The workshop covered the methodology and use of the Hercules framework (developed as part of my Ph.D.) --- a MapReduce algorithm for quantifying non-uniform gene expression.